- r -

• read_count() : vdj_pipe::Pipe_environment , vdj_pipe::Value_map
• read_count_incr() : vdj_pipe::Value_map
• read_count_reset() : vdj_pipe::Value_map
• read_id() : vdj_pipe::Value_map
• read_id_nothrow() : vdj_pipe::Value_map
• Read_info() : vdj_pipe::Read_info
• Read_info_store() : vdj_pipe::Read_info_store
• redundancy_histogram() : vdj_pipe::Group_unique
• register_plot() : vdj_pipe::Output_manager
• Relative_interval() : vdj_pipe::match::Relative_interval
• Relative_position() : vdj_pipe::match::Relative_position
• remove_subsequence() : vdj_pipe::Seq_store
• reserve() : vdj_pipe::detail::Id_map< Id, Obj, Stor > , vdj_pipe::detail::Vector_set< T, Alloc >
• reset() : vdj_pipe::Vm_access_single
• reset_access() : vdj_pipe::Blank_step , vdj_pipe::detail::Step_base_single , vdj_pipe::Histogram_step , vdj_pipe::Write_value
• result() : vdj_pipe::match::Match_element_positional
• rev2frw() : vdj_pipe::Seq_file_map
• reverse() : vdj_pipe::Read_info , vdj_pipe::Seq_file , vdj_pipe::Value_names
• root() : vdj_pipe::gdst::Gdst
• run() : vdj_pipe::Ambiguous_window_filter , vdj_pipe::Apply_many , vdj_pipe::Apply_one , vdj_pipe::Average_quality_filter , vdj_pipe::Average_quality_window_filter , vdj_pipe::Blank_step , vdj_pipe::Character_filter , vdj_pipe::Composition_stats , vdj_pipe::External_mid_infile , vdj_pipe::External_mid_inline , vdj_pipe::Find_shared , vdj_pipe::Histogram_step , vdj_pipe::Homopolymer_filter , vdj_pipe::Length_filter , vdj_pipe::Match_step , vdj_pipe::Merge_paired , vdj_pipe::Min_quality_filter , vdj_pipe::Min_quality_window_filter , vdj_pipe::Pipe_paired_emid_read , vdj_pipe::Pipe_paired_read , vdj_pipe::Pipe_single_read , vdj_pipe::Pipeline< Config > , vdj_pipe::Qual_stats , vdj_pipe::test::Step_harness< Step > , vdj_pipe::Write_seq , vdj_pipe::Write_value