- i -

• id() : vdj_pipe::gdst::Depth_iter , vdj_pipe::Seq_entry , vdj_pipe::Seq_file
• id1() : vdj_pipe::Best_match_pair< ID, Score >
• Id1() : vdj_pipe::test::Id1
• id2() : vdj_pipe::Best_match_pair< ID, Score >
• Id2() : vdj_pipe::test::Id2
• Id_bimap() : vdj_pipe::detail::Id_bimap< Id, Obj >
• Id_iterator() : vdj_pipe::Id_iterator< Id >
• Id_map() : vdj_pipe::detail::Id_map< Id, Obj, Stor >
• increment() : vdj_pipe::Id_iterator< Id >
• index() : vdj_pipe::gdst::Pattern_iter
• info_index_init() : vdj_pipe::Read_info_store
• init() : vdj_pipe::gdst::Children , vdj_pipe::Variable_path
• init_options() : vdj_pipe::Command_line_options
• init_queue() : vdj_pipe::File_ostream_variant
• init_single() : vdj_pipe::File_ostream_variant
• init_stream() : vdj_pipe::Find_shared
• input() : vdj_pipe::Pipe_environment
• input_csv() : vdj_pipe::Pipe_environment
• Input_manager() : vdj_pipe::Input_manager
• insert() : vdj_pipe::detail::Id_bimap< Id, Obj > , vdj_pipe::detail::Id_map< Id, Obj, Stor > , vdj_pipe::detail::Vector_set< T, Alloc > , vdj_pipe::gdst::Gdst , vdj_pipe::gdst::Ukkonen_inserter , vdj_pipe::Read_ginfo_store , vdj_pipe::Read_info_store , vdj_pipe::Seq_file_map , vdj_pipe::Seq_map_aligned , vdj_pipe::Seq_map_full , vdj_pipe::Seq_map_short , vdj_pipe::Seq_store
• Insert() : vdj_pipe::step::Step_builder_registry< Config >::Insert
• insert_combination() : vdj_pipe::match::Match_element_factory
• insert_element() : vdj_pipe::match::Match_element_factory
• insert_name() : vdj_pipe::detail::Named_value_map< Id, Val > , vdj_pipe::Value_map
• insert_new_name() : vdj_pipe::detail::Named_value_map< Id, Val > , vdj_pipe::Value_map
• Inserter() : vdj_pipe::detail::Inserter
• interval() : vdj_pipe::match::Element_proto , vdj_pipe::Vm_access_single
• interval_fwd() : vdj_pipe::Value_ids_paired , vdj_pipe::Vm_access_paired
• interval_rev() : vdj_pipe::Value_ids_paired , vdj_pipe::Vm_access_paired
• is_acceptable() : vdj_pipe::Best_match_pair< ID, Score >
• Is_ambiguous() : vdj_pipe::Is_ambiguous
• is_complete() : vdj_pipe::anonymous_namespace{pipe_paired_emid_read.cpp}::Four_file_ids
• is_empty() : vdj_pipe::detail::Interval_checking_policy< int >
• is_help() : vdj_pipe::Command_line_options
• is_nan() : vdj_pipe::detail::Interval_checking_policy< int >
• is_only_group() : vdj_pipe::Group_unique
• is_paired() : vdj_pipe::Input_manager , vdj_pipe::Seq_file_entry
• is_reverse() : vdj_pipe::Read_info , vdj_pipe::Seq_file , vdj_pipe::Value_ids_single , vdj_pipe::Vm_access_single
• istream() : vdj_pipe::File_istream