vdj_pipe
pipeline for processing DNA sequence data
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- p -
pass_id_ :
vdj_pipe::detail::Filter_base
path_ :
vdj_pipe::File
patt_ :
vdj_pipe::gdst::Pattern_iter
pe :
vdj_pipe::Average_quality_filter
,
vdj_pipe::Average_quality_window_filter
,
vdj_pipe::Character_filter
,
vdj_pipe::Find_shared
,
vdj_pipe::Histogram_step
,
vdj_pipe::Homopolymer_filter
,
vdj_pipe::Length_filter
,
vdj_pipe::Min_quality_filter
,
vdj_pipe::Min_quality_window_filter
,
vdj_pipe::Write_seq
,
vdj_pipe::Write_value
pe_ :
vdj_pipe::Pipe_paired_emid_read
,
vdj_pipe::Pipe_paired_read
,
vdj_pipe::Pipe_single_read
,
vdj_pipe::Pipeline< Config >
pi_ :
vdj_pipe::gdst::Pattern_iter
pid_ :
vdj_pipe::Seq_file
plot_list_ :
vdj_pipe::Output_manager
pn_ :
vdj_pipe::gdst::Match
pos_ :
vdj_pipe::match::Cut_proto
,
vdj_pipe::match::Element_proto
,
vdj_pipe::match::Relative_position
,
vdj_pipe::Seq_pos< Id >
,
vdj_pipe::Unambiguous_interval_iter
prev_branch_ :
vdj_pipe::gdst::Ukkonen_inserter
prev_leaf_ :
vdj_pipe::gdst::Ukkonen_inserter
pt :
vdj_pipe::Average_quality_filter
,
vdj_pipe::Average_quality_window_filter
,
vdj_pipe::Character_filter
,
vdj_pipe::Find_shared
,
vdj_pipe::Histogram_step
,
vdj_pipe::Homopolymer_filter
,
vdj_pipe::Length_filter
,
vdj_pipe::Min_quality_filter
,
vdj_pipe::Min_quality_window_filter
,
vdj_pipe::Write_seq
,
vdj_pipe::Write_value
pt_ :
vdj_pipe::File_ostream_queue
,
vdj_pipe::Variable_path
ptm_ :
vdj_pipe::Output_manager
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