Here is a list of all class members with links to the classes they belong to:
- m -
- m_
: vdj_pipe::detail::Id_bimap< Id, Obj >::Equal_id
, vdj_pipe::detail::Id_bimap< Id, Obj >::Equal_obj< ObjCompat >
, vdj_pipe::detail::Id_bimap< Id, Obj >::Hash_id
, vdj_pipe::Group_unique
, vdj_pipe::Read_ginfo_store
- make()
: vdj_pipe::step::Apply_to_maker
, vdj_pipe::step::Maker< Step >
, vdj_pipe::step::Step_builder_registry< Config >::Insert
, vdj_pipe::step::Step_builder_registry< Config >
- make_dir()
: vdj_pipe::Output_manager
- make_fisb()
: vdj_pipe::File_istream
- make_fosb()
: vdj_pipe::File_ostream
- make_header()
: vdj_pipe::Write_value
- make_ids()
: vdj_pipe::step::Apply_to_maker
- make_impl()
: vdj_pipe::step::Step_builder_registry< Config >
- make_path()
: vdj_pipe::Queable_ofstream
- map_
: vdj_pipe::detail::Id_bimap< Id, Obj >
, vdj_pipe::Histogram_step
, vdj_pipe::Seq_file_entry
, vdj_pipe::Seq_file_map
, vdj_pipe::Value_map
- map_iter
: vdj_pipe::match::Match_combination
- map_ptr
: vdj_pipe::Value_map
- map_t
: vdj_pipe::detail::Id_bimap< Id, Obj >
, vdj_pipe::File_ostream_queue
, vdj_pipe::Histogram_step
, vdj_pipe::Seq_file_entry
- map_type
: vdj_pipe::Value_map
- maps_from()
: vdj_pipe::Seq_store
- maps_to()
: vdj_pipe::Seq_store
- MASK
: vdj_pipe::Seq_fls< N, S >
- Match()
: vdj_pipe::gdst::Match
, vdj_pipe::Seq_map_aligned::Match
- Match_combination()
: vdj_pipe::match::Match_combination
- Match_element_aligned()
: vdj_pipe::match::Match_element_aligned
- Match_element_ambiguous()
: vdj_pipe::match::Match_element_ambiguous
- Match_element_battery()
: vdj_pipe::match::Match_element_battery
- Match_element_factory()
: vdj_pipe::match::Match_element_factory
- Match_element_positional()
: vdj_pipe::match::Match_element_positional
- Match_element_short()
: vdj_pipe::match::Match_element_short
- Match_element_visitor()
: vdj_pipe::match::Match_element_visitor
- Match_fraction_length()
: vdj_pipe::Match_fraction_length
- Match_ignore_ends()
: vdj_pipe::Match_ignore_ends
- Match_min_length()
: vdj_pipe::Match_min_length
- Match_step()
: vdj_pipe::Match_step
- match_type
: vdj_pipe::detail::External_mid_base
, vdj_pipe::gdst::Gdst
, vdj_pipe::Seq_map_full
, vdj_pipe::Seq_map_short
- match_vector
: vdj_pipe::gdst::Gdst
- max_
: vdj_pipe::Length_filter
- max_ambiguous_
: vdj_pipe::Ambiguous_window_filter
- MAX_CHARS
: vdj_pipe::Seq_fls< N, S >
- max_file_reads()
: vdj_pipe::Command_line_options
, vdj_pipe::Pipe_environment
- max_file_reads_
: vdj_pipe::Command_line_options
, vdj_pipe::Pipe_environment
- max_id()
: vdj_pipe::detail::Id_bimap< Id, Obj >
, vdj_pipe::detail::Id_map< Id, Obj, Stor >
, vdj_pipe::Seq_map_aligned
, vdj_pipe::Seq_map_full
, vdj_pipe::Seq_map_short
- max_len()
: vdj_pipe::Seq_map_full
- max_len_
: vdj_pipe::Seq_map_full
- max_reads()
: vdj_pipe::Command_line_options
, vdj_pipe::Pipe_environment
- max_reads_
: vdj_pipe::Command_line_options
, vdj_pipe::Pipe_environment
- max_size_
: vdj_pipe::detail::Seq_props
- mb_
: vdj_pipe::Match_step
- md_
: vdj_pipe::gdst::Ukkonen_inserter
- me_battery_ptr
: vdj_pipe::Match_step
- me_deps_
: vdj_pipe::match::Match_element_battery
- Merge_paired()
: vdj_pipe::Merge_paired
- merged()
: vdj_pipe::Value_names
- Meta()
: vdj_pipe::Step_registry::Meta
- mev_
: vdj_pipe::match::Match_combination
, vdj_pipe::match::Match_element_battery
- mid()
: vdj_pipe::Seq_file_entry
- mid2seq()
: vdj_pipe::Seq_file_map
- mid_
: vdj_pipe::Group_unique
, vdj_pipe::Read_ginfo
, vdj_pipe::Seq_file_entry
- mid_frw_
: vdj_pipe::anonymous_namespace{pipe_paired_emid_read.cpp}::Four_file_ids
- mid_index
: vdj_pipe::Read_ginfo_store
- mid_iterator
: vdj_pipe::Read_ginfo_store
- mid_range
: vdj_pipe::Read_ginfo_store
- mid_rev()
: vdj_pipe::Seq_file_entry
- mid_rev_
: vdj_pipe::anonymous_namespace{pipe_paired_emid_read.cpp}::Four_file_ids
, vdj_pipe::Seq_file_entry
- mid_size()
: vdj_pipe::detail::External_mid_base
- mid_size_
: vdj_pipe::Seq_map_short
- min_
: vdj_pipe::Average_quality_filter
, vdj_pipe::Get_match_length
, vdj_pipe::Homopolymer_filter
, vdj_pipe::Length_filter
, vdj_pipe::Match_fraction_length
, vdj_pipe::Match_ignore_ends
, vdj_pipe::Match_min_length
, vdj_pipe::Min_quality_filter
- min_d_
: vdj_pipe::gdst::Match
- min_duplicates_
: vdj_pipe::Find_shared
- min_id()
: vdj_pipe::detail::Id_bimap< Id, Obj >
, vdj_pipe::detail::Id_map< Id, Obj, Stor >
- min_len()
: vdj_pipe::Seq_map_full
- min_len_
: vdj_pipe::Ambiguous_window_filter
, vdj_pipe::Average_quality_window_filter
, vdj_pipe::Min_quality_window_filter
, vdj_pipe::Seq_map_full
, vdj_pipe::Unambiguous_interval_iter
- min_match_len_
: vdj_pipe::match::Match_element_aligned
- min_match_length_
: vdj_pipe::match::Element_proto
- min_qual_
: vdj_pipe::Min_quality_window_filter
- min_qual_l_
: vdj_pipe::Average_quality_window_filter
- min_score_
: vdj_pipe::detail::External_mid_base
, vdj_pipe::match::Element_proto
, vdj_pipe::match::Match_element_aligned
, vdj_pipe::match::Match_element_ambiguous
, vdj_pipe::match::Match_element_short
, vdj_pipe::Merge_paired
- min_size_
: vdj_pipe::detail::Seq_props
- mismatch_
: vdj_pipe::gdst::Match
, vdj_pipe::gdst::Pattern_iter
- mm3_
: vdj_pipe::Sequence_bstats
, vdj_pipe::Sequence_gstats
- mm5_
: vdj_pipe::Sequence_bstats
, vdj_pipe::Sequence_gstats
- mm_
: vdj_pipe::detail::Inserter
, vdj_pipe::Step_registry
- mmap_t
: vdj_pipe::Step_registry
- mqh_
: vdj_pipe::Qual_stats
- msg_t
: vdj_pipe::base_exception