Here is a list of all class members with links to the classes they belong to:

- p -

• pair : vdj_pipe::Group_unique
• Pair() : vdj_pipe::Seq_file_map::Pair
• pair_map : vdj_pipe::Seq_file_map
• parse() : vdj_pipe::match::Cut_proto
• parse_csv_file() : vdj_pipe::match::Element_proto
• parse_position() : vdj_pipe::match::Element_proto
• Parser_fasta() : vdj_pipe::Parser_fasta
• Parser_fastq() : vdj_pipe::Parser_fastq
• Parser_line() : vdj_pipe::detail::Parser_line
• Parser_qual() : vdj_pipe::Parser_qual
• pass() : vdj_pipe::detail::Filter_base
• pass_id_ : vdj_pipe::detail::Filter_base
• path() : vdj_pipe::File , vdj_pipe::Input_manager , vdj_pipe::Output_manager
• path_ : vdj_pipe::File
• path_index : vdj_pipe::Seq_file_map
• path_iterator : vdj_pipe::Seq_file_map
• path_t : vdj_pipe::Output_manager
• path_template : vdj_pipe::detail::Queable_ofstream_types , vdj_pipe::File_ostream_queue , vdj_pipe::File_ostream_variant , vdj_pipe::Queable_ofstream
• paths() : vdj_pipe::anonymous_namespace{pipe_paired_emid_read.cpp}::Four_file_ids
• patt_ : vdj_pipe::gdst::Pattern_iter
• pattern_char() : vdj_pipe::gdst::Pattern_iter
• Pattern_iter() : vdj_pipe::gdst::Pattern_iter
• pe : vdj_pipe::Average_quality_filter , vdj_pipe::Average_quality_window_filter , vdj_pipe::Character_filter , vdj_pipe::Find_shared , vdj_pipe::Histogram_step , vdj_pipe::Homopolymer_filter , vdj_pipe::Length_filter , vdj_pipe::Min_quality_filter , vdj_pipe::Min_quality_window_filter , vdj_pipe::Pipe_paired_emid_read , vdj_pipe::Pipe_paired_read , vdj_pipe::Pipe_single_read , vdj_pipe::Write_seq , vdj_pipe::Write_value
• pe_ : vdj_pipe::Pipe_paired_emid_read , vdj_pipe::Pipe_paired_read , vdj_pipe::Pipe_single_read , vdj_pipe::Pipeline< Config >
• pi_ : vdj_pipe::gdst::Pattern_iter
• pid_ : vdj_pipe::Seq_file
• Pipe_environment() : vdj_pipe::Pipe_environment
• Pipe_paired_emid_read() : vdj_pipe::Pipe_paired_emid_read
• Pipe_paired_read() : vdj_pipe::Pipe_paired_read
• Pipe_single_read() : vdj_pipe::Pipe_single_read
• Pipeline() : vdj_pipe::Pipeline< Config >
• plot_list_ : vdj_pipe::Output_manager
• plot_pair : vdj_pipe::Output_manager
• plot_type_map : vdj_pipe::Output_manager
• pn_ : vdj_pipe::gdst::Match
• pop_back() : vdj_pipe::detail::Vector_set< T, Alloc >
• pos2id() : vdj_pipe::detail::Id_bimap< Id, Obj > , vdj_pipe::detail::Id_map< Id, Obj, Stor >
• pos_ : vdj_pipe::match::Cut_proto , vdj_pipe::match::Element_proto , vdj_pipe::match::Relative_position , vdj_pipe::Seq_pos< Id > , vdj_pipe::Unambiguous_interval_iter
• pos_inf() : vdj_pipe::detail::Interval_checking_policy< int >
• position() : vdj_pipe::match::Cut_proto , vdj_pipe::match::Relative_interval
• prev_branch_ : vdj_pipe::gdst::Ukkonen_inserter
• prev_leaf_ : vdj_pipe::gdst::Ukkonen_inserter
• print() : vdj_pipe::Histogram_1d , vdj_pipe::Lib_info , vdj_pipe::Seq_fls< N, S > , vdj_pipe::Sequence_bstats , vdj_pipe::Sequence_gstats
• print_header() : vdj_pipe::Sequence_bstats , vdj_pipe::Sequence_gstats
• print_help() : vdj_pipe::Command_line_options
• print_info() : vdj_pipe::Command_line_options
• print_summary() : vdj_pipe::Pipe_environment
• print_usage() : vdj_pipe::Command_line_options
• print_version() : vdj_pipe::Command_line_options , vdj_pipe::Lib_info
• process_fasta_qual() : vdj_pipe::Pipe_paired_emid_read , vdj_pipe::Pipe_paired_read , vdj_pipe::Pipe_single_read
• process_fastq() : vdj_pipe::Pipe_paired_emid_read , vdj_pipe::Pipe_paired_read , vdj_pipe::Pipe_single_read
• process_more() : vdj_pipe::Pipe_environment
• process_read() : vdj_pipe::Pipe_environment , vdj_pipe::Pipeline< Config >
• processing_step : vdj_pipe::Config_paired_emid_reads , vdj_pipe::Config_paired_reads , vdj_pipe::Config_single_reads , vdj_pipe::Pipeline< Config >
• pt : vdj_pipe::Average_quality_filter , vdj_pipe::Average_quality_window_filter , vdj_pipe::Character_filter , vdj_pipe::Find_shared , vdj_pipe::Histogram_step , vdj_pipe::Homopolymer_filter , vdj_pipe::Length_filter , vdj_pipe::Min_quality_filter , vdj_pipe::Min_quality_window_filter , vdj_pipe::Write_seq , vdj_pipe::Write_value
• pt_ : vdj_pipe::File_ostream_queue , vdj_pipe::Variable_path
• ptm_ : vdj_pipe::Output_manager
• push_back() : vdj_pipe::Step_variant_store